Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Gm15429-201ENSMUST00000151268 798 ntBASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Gm8602-201ENSMUST00000184045 607 ntBASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Gm5069-202ENSMUST00000192714 1011 ntBASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Gm5035-201ENSMUST00000215581 927 ntBASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Gm24447-201ENSMUST00000083977 338 ntBASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC18.02■□□□□ 0.48
Rab11fip3Q8CHD8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC18.02■□□□□ 0.47
Rab11fip3Q8CHD8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rab11fip3Q8CHD8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rab11fip3Q8CHD8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rab11fip3Q8CHD8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rab11fip3Q8CHD8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rab11fip3Q8CHD8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Rab11fip3Q8CHD8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Gm14127-201ENSMUST00000117906 678 ntBASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Gm38223-201ENSMUST00000194484 695 ntBASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Gm5161-201ENSMUST00000075243 853 ntBASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip3Q8CHD8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Gm17150-201ENSMUST00000165577 381 ntBASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Gm2445-201ENSMUST00000182798 989 ntBASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Gm2495-201ENSMUST00000191160 466 ntBASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip3Q8CHD8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Gm6244-201ENSMUST00000178732 841 ntBASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Gm8463-201ENSMUST00000208573 613 ntBASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Gm6983-201ENSMUST00000214912 628 ntBASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms