Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox30Q8CGW4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Gm5566-201ENSMUST00000116118 459 ntBASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Gm29541-201ENSMUST00000191351 678 ntBASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox30Q8CGW4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Acot6-202ENSMUST00000222921 3622 ntBASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Gm11745-201ENSMUST00000121669 448 ntBASIC15.24■□□□□ 0.03
Sox30Q8CGW4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Sox30Q8CGW4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Gm25287-201ENSMUST00000103846 110 ntBASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Gm22918-201ENSMUST00000103855 110 ntBASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Rprl2-201ENSMUST00000157150 290 ntBASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox30Q8CGW4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Sox30Q8CGW4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox30Q8CGW4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox30Q8CGW4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox30Q8CGW4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox30Q8CGW4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox30Q8CGW4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox30Q8CGW4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms