Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Gm6447-201ENSMUST00000118905 835 ntBASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Gm13316-201ENSMUST00000140537 691 ntBASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Gm22902-201ENSMUST00000158488 302 ntBASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rp1l1Q8CGM2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Gm25214-201ENSMUST00000104573 129 ntBASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Gm37042-201ENSMUST00000193816 581 ntBASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rp1l1Q8CGM2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Gm14130-201ENSMUST00000118417 987 ntBASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Gm44069-201ENSMUST00000204898 506 ntBASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Gm23270-201ENSMUST00000104055 131 ntBASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Gm4909-201ENSMUST00000118749 794 ntBASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rp1l1Q8CGM2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Rp1l1Q8CGM2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.17□□□□□ -0.14
Rp1l1Q8CGM2 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.17□□□□□ -0.14
Rp1l1Q8CGM2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rp1l1Q8CGM2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rp1l1Q8CGM2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms