Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc38Q8CDN8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc38Q8CDN8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc38Q8CDN8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc38Q8CDN8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Gm9719-201ENSMUST00000162765 543 ntBASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 AA543401-201ENSMUST00000164248 1269 ntBASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Mir125a-201ENSMUST00000083545 68 ntBASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc38Q8CDN8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Gm4780-202ENSMUST00000215200 2644 ntBASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc38Q8CDN8 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Gm11594-201ENSMUST00000122313 162 ntBASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc38Q8CDN8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc38Q8CDN8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.52■□□□□ 0.08
Ccdc38Q8CDN8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc38Q8CDN8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc38Q8CDN8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms