Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc87Q8CDL9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
Ccdc87Q8CDL9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc87Q8CDL9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc87Q8CDL9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc87Q8CDL9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc87Q8CDL9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc87Q8CDL9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc87Q8CDL9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc87Q8CDL9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Gm7063-201ENSMUST00000186840 981 ntBASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc87Q8CDL9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Gm18041-201ENSMUST00000218210 618 ntBASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc87Q8CDL9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Gm14701-201ENSMUST00000117156 348 ntBASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc87Q8CDL9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms