Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Gm29741-201ENSMUST00000192667 421 ntBASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc60Q8C4J0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc60Q8C4J0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc60Q8C4J0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Syt7-204ENSMUST00000223586 1344 ntBASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Gm15321-201ENSMUST00000121290 288 ntBASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Gm4804-201ENSMUST00000182234 999 ntBASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms