Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp44Q8C2S0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Usp44Q8C2S0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Gm44719-201ENSMUST00000206404 149 ntBASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.31■□□□□ 0.2
Usp44Q8C2S0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Gm18905-201ENSMUST00000205454 928 ntBASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Usp44Q8C2S0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp44Q8C2S0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms