Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Usp47Q8BY87 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 AC150560.1-201ENSMUST00000227731 1187 ntBASIC19.61■□□□□ 0.73
Usp47Q8BY87 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp47Q8BY87 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.6■□□□□ 0.73
Usp47Q8BY87 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC19.6■□□□□ 0.73
Usp47Q8BY87 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp47Q8BY87 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Gm21451-201ENSMUST00000111062 2775 ntBASIC19.59■□□□□ 0.73
Usp47Q8BY87 Gm15770-201ENSMUST00000117498 584 ntBASIC19.59■□□□□ 0.73
Usp47Q8BY87 Gm12960-201ENSMUST00000120017 1066 ntBASIC19.59■□□□□ 0.73
Usp47Q8BY87 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Gm15429-201ENSMUST00000151268 798 ntBASIC19.59■□□□□ 0.73
Usp47Q8BY87 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Gm24447-201ENSMUST00000083977 338 ntBASIC19.59■□□□□ 0.73
Usp47Q8BY87 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Gm43056-201ENSMUST00000197865 2791 ntBASIC19.59■□□□□ 0.73
Usp47Q8BY87 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp47Q8BY87 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp47Q8BY87 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Usp47Q8BY87 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC19.58■□□□□ 0.73
Usp47Q8BY87 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC19.58■□□□□ 0.73
Usp47Q8BY87 Gm29608-201ENSMUST00000190444 463 ntBASIC19.58■□□□□ 0.73
Usp47Q8BY87 Gm5069-202ENSMUST00000192714 1011 ntBASIC19.58■□□□□ 0.73
Usp47Q8BY87 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp47Q8BY87 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp47Q8BY87 Gm5161-201ENSMUST00000075243 853 ntBASIC19.58■□□□□ 0.73
Usp47Q8BY87 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp47Q8BY87 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Usp47Q8BY87 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Usp47Q8BY87 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp47Q8BY87 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Usp47Q8BY87 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC19.58■□□□□ 0.73
Usp47Q8BY87 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Usp47Q8BY87 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp47Q8BY87 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Usp47Q8BY87 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp47Q8BY87 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC19.57■□□□□ 0.72
Usp47Q8BY87 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.57■□□□□ 0.72
Usp47Q8BY87 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Usp47Q8BY87 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms