Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap1Q8BTW8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap1Q8BTW8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdk5rap1Q8BTW8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap1Q8BTW8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cdk5rap1Q8BTW8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap1Q8BTW8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap1Q8BTW8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap1Q8BTW8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap1Q8BTW8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap1Q8BTW8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.27□□□□□ -0.29
Cdk5rap1Q8BTW8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm13385-201ENSMUST00000121089 220 ntBASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap1Q8BTW8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm12134-201ENSMUST00000122109 520 ntBASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm24420-201ENSMUST00000176676 59 ntBASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cdk5rap1Q8BTW8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms