Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Gm3436-201ENSMUST00000179930 840 ntBASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Gm27989-201ENSMUST00000184721 107 ntBASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Gm33320-201ENSMUST00000192232 530 ntBASIC14.25□□□□□ -0.13
Sfr1Q8BP27 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sfr1Q8BP27 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Mir8102-201ENSMUST00000184148 139 ntBASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Gm7775-201ENSMUST00000218871 853 ntBASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sfr1Q8BP27 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Mir7684-201ENSMUST00000183858 60 ntBASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Gm20949-201ENSMUST00000206478 952 ntBASIC14.23□□□□□ -0.13
Sfr1Q8BP27 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sfr1Q8BP27 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms