Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp54Q8BL06 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp54Q8BL06 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Usp54Q8BL06 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp54Q8BL06 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Gm11637-201ENSMUST00000120601 592 ntBASIC19.51■□□□□ 0.71
Usp54Q8BL06 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC19.51■□□□□ 0.71
Usp54Q8BL06 AC122305.4-201ENSMUST00000216159 1206 ntBASIC19.51■□□□□ 0.71
Usp54Q8BL06 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp54Q8BL06 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp54Q8BL06 AC096628.2-201ENSMUST00000225443 1413 ntBASIC19.5■□□□□ 0.71
Usp54Q8BL06 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp54Q8BL06 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Gm7993-201ENSMUST00000200970 1384 ntBASIC19.49■□□□□ 0.71
Usp54Q8BL06 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Gm17376-201ENSMUST00000166016 84 ntBASIC19.49■□□□□ 0.71
Usp54Q8BL06 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp54Q8BL06 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Gm45760-201ENSMUST00000212190 1782 ntBASIC19.49■□□□□ 0.71
Usp54Q8BL06 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp54Q8BL06 Gm4986-201ENSMUST00000119731 549 ntBASIC19.49■□□□□ 0.71
Usp54Q8BL06 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Gm44207-201ENSMUST00000204568 1424 ntBASIC19.48■□□□□ 0.71
Usp54Q8BL06 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Gm43579-201ENSMUST00000202387 1307 ntBASIC19.48■□□□□ 0.71
Usp54Q8BL06 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp54Q8BL06 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Gm15370-201ENSMUST00000117158 253 ntBASIC19.48■□□□□ 0.71
Usp54Q8BL06 Gm11978-201ENSMUST00000122315 466 ntBASIC19.48■□□□□ 0.71
Usp54Q8BL06 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Mir7070-201ENSMUST00000183657 86 ntBASIC19.48■□□□□ 0.71
Usp54Q8BL06 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Usp54Q8BL06 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp54Q8BL06 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Usp54Q8BL06 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Usp54Q8BL06 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp54Q8BL06 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC19.47■□□□□ 0.71
Usp54Q8BL06 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp54Q8BL06 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp54Q8BL06 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Usp54Q8BL06 Gm21769-201ENSMUST00000211922 111 ntBASIC19.47■□□□□ 0.71
Usp54Q8BL06 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp54Q8BL06 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms