Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Gm15371-201ENSMUST00000117057 784 ntBASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Gm17420-201ENSMUST00000164753 153 ntBASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Gm38223-201ENSMUST00000194484 695 ntBASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Usp6nlQ80XC3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Gm38671-201ENSMUST00000200573 130 ntBASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp6nlQ80XC3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Gm23931-201ENSMUST00000103842 109 ntBASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms