Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.04□□□□□ -0.16
Usp8Q80U87 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp8Q80U87 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp8Q80U87 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp8Q80U87 Gm8000-201ENSMUST00000188378 592 ntBASIC14.03□□□□□ -0.16
Usp8Q80U87 Gm6443-201ENSMUST00000203599 874 ntBASIC14.03□□□□□ -0.16
Usp8Q80U87 Gm18057-201ENSMUST00000208220 503 ntBASIC14.03□□□□□ -0.16
Usp8Q80U87 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.03□□□□□ -0.16
Usp8Q80U87 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp8Q80U87 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.03□□□□□ -0.16
Usp8Q80U87 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.03□□□□□ -0.16
Usp8Q80U87 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Usp8Q80U87 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Usp8Q80U87 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp8Q80U87 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp8Q80U87 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp8Q80U87 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp8Q80U87 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Usp8Q80U87 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp8Q80U87 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.02□□□□□ -0.16
Usp8Q80U87 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Usp8Q80U87 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp8Q80U87 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Usp8Q80U87 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp8Q80U87 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.02□□□□□ -0.16
Usp8Q80U87 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp8Q80U87 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Usp8Q80U87 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.02□□□□□ -0.17
Usp8Q80U87 Gm5264-201ENSMUST00000190584 848 ntBASIC14.02□□□□□ -0.17
Usp8Q80U87 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.02□□□□□ -0.17
Usp8Q80U87 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp8Q80U87 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Usp8Q80U87 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Usp8Q80U87 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp8Q80U87 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Usp8Q80U87 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp8Q80U87 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp8Q80U87 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp8Q80U87 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.02□□□□□ -0.17
Usp8Q80U87 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Usp8Q80U87 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp8Q80U87 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp8Q80U87 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp8Q80U87 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp8Q80U87 Gm2810-201ENSMUST00000118681 990 ntBASIC14.01□□□□□ -0.17
Usp8Q80U87 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.01□□□□□ -0.17
Usp8Q80U87 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp8Q80U87 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp8Q80U87 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp8Q80U87 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp8Q80U87 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp8Q80U87 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp8Q80U87 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms