Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh19Q80TF3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Gm12134-201ENSMUST00000122109 520 ntBASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Gm5279-201ENSMUST00000199575 745 ntBASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.7□□□□□ -0.22
Pcdh19Q80TF3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Gm6912-201ENSMUST00000117218 544 ntBASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh19Q80TF3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Gm11478-201ENSMUST00000117851 599 ntBASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh19Q80TF3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms