Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.62□□□□□ -0.23
Scn4bQ7M729 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.62□□□□□ -0.23
Scn4bQ7M729 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Gm15693-201ENSMUST00000120470 637 ntBASIC13.62□□□□□ -0.23
Scn4bQ7M729 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.62□□□□□ -0.23
Scn4bQ7M729 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.62□□□□□ -0.23
Scn4bQ7M729 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.62□□□□□ -0.23
Scn4bQ7M729 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.62□□□□□ -0.23
Scn4bQ7M729 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.62□□□□□ -0.23
Scn4bQ7M729 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn4bQ7M729 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Gm12428-201ENSMUST00000119844 727 ntBASIC13.61□□□□□ -0.23
Scn4bQ7M729 Mir1897-201ENSMUST00000122581 272 ntBASIC13.61□□□□□ -0.23
Scn4bQ7M729 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Gm27622-201ENSMUST00000183779 60 ntBASIC13.61□□□□□ -0.23
Scn4bQ7M729 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.61□□□□□ -0.23
Scn4bQ7M729 Gm6916-202ENSMUST00000205523 195 ntBASIC13.61□□□□□ -0.23
Scn4bQ7M729 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.61□□□□□ -0.23
Scn4bQ7M729 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.61□□□□□ -0.23
Scn4bQ7M729 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn4bQ7M729 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Acot6-202ENSMUST00000222921 3622 ntBASIC13.6□□□□□ -0.23
Scn4bQ7M729 Gm13616-201ENSMUST00000120600 222 ntBASIC13.6□□□□□ -0.23
Scn4bQ7M729 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn4bQ7M729 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn4bQ7M729 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms