Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nudcd1Q6PIP5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nudcd1Q6PIP5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Nudcd1Q6PIP5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nudcd1Q6PIP5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nudcd1Q6PIP5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nudcd1Q6PIP5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Gm6745-201ENSMUST00000199216 526 ntBASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nudcd1Q6PIP5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nudcd1Q6PIP5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms