Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Gm6447-201ENSMUST00000118905 835 ntBASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Snora73a-201ENSMUST00000082453 205 ntBASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nup98Q6PFD9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Gm38002-201ENSMUST00000193255 180 ntBASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Gm1335-201ENSMUST00000121653 386 ntBASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nup98Q6PFD9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup98Q6PFD9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Gm12384-201ENSMUST00000119228 919 ntBASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms