Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Gm28033-201ENSMUST00000184224 96 ntBASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Gm9682-201ENSMUST00000197505 556 ntBASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf220Q6PDX6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Gm7222-201ENSMUST00000117512 906 ntBASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Rnf220Q6PDX6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms