Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Gm18737-201ENSMUST00000173594 937 ntBASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd3Q6P9Z1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Gm17271-201ENSMUST00000165535 355 ntBASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Mir3113-201ENSMUST00000175478 76 ntBASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Gm20553-201ENSMUST00000204205 844 ntBASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.8□□□□□ -0.36
Smarcd3Q6P9Z1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms