Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.17□□□□□ -0.14
Casc4Q6P2L7 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Gm12151-201ENSMUST00000121374 290 ntBASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Mir7023-201ENSMUST00000185093 64 ntBASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Gm6916-202ENSMUST00000205523 195 ntBASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Casc4Q6P2L7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Gm12428-201ENSMUST00000119844 727 ntBASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Casc4Q6P2L7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Casc4Q6P2L7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Casc4Q6P2L7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Casc4Q6P2L7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Casc4Q6P2L7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms