Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Gm28630-201ENSMUST00000187806 498 ntBASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Gm43575-201ENSMUST00000196420 516 ntBASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Gm5312-201ENSMUST00000203728 547 ntBASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sp140Q6NSQ5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Gm24543-201ENSMUST00000103867 82 ntBASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Gm6736-201ENSMUST00000166583 948 ntBASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Gm6916-202ENSMUST00000205523 195 ntBASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sp140Q6NSQ5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sp140Q6NSQ5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms