Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.93□□□□□ -0.34
AtmQ62388 Gm23699-201ENSMUST00000158835 135 ntBASIC12.93□□□□□ -0.34
AtmQ62388 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.93□□□□□ -0.34
AtmQ62388 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.93□□□□□ -0.34
AtmQ62388 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.93□□□□□ -0.34
AtmQ62388 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
AtmQ62388 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
AtmQ62388 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.93□□□□□ -0.34
AtmQ62388 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.93□□□□□ -0.34
AtmQ62388 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Gm7857-201ENSMUST00000117957 358 ntBASIC12.93□□□□□ -0.34
AtmQ62388 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.93□□□□□ -0.34
AtmQ62388 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.93□□□□□ -0.34
AtmQ62388 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
AtmQ62388 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
AtmQ62388 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
AtmQ62388 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
AtmQ62388 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.93□□□□□ -0.34
AtmQ62388 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
AtmQ62388 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC12.92□□□□□ -0.34
AtmQ62388 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.92□□□□□ -0.34
AtmQ62388 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
AtmQ62388 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.92□□□□□ -0.34
AtmQ62388 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.92□□□□□ -0.34
AtmQ62388 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.92□□□□□ -0.34
AtmQ62388 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.92□□□□□ -0.34
AtmQ62388 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.92□□□□□ -0.34
AtmQ62388 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.92□□□□□ -0.34
AtmQ62388 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.92□□□□□ -0.34
AtmQ62388 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.92□□□□□ -0.34
AtmQ62388 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
AtmQ62388 Gm29741-201ENSMUST00000192667 421 ntBASIC12.92□□□□□ -0.34
AtmQ62388 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
AtmQ62388 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
AtmQ62388 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AtmQ62388 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
AtmQ62388 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
AtmQ62388 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Gm43378-201ENSMUST00000199336 582 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms