Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VcanQ62059 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
VcanQ62059 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
VcanQ62059 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.83□□□□□ -0.36
VcanQ62059 Gm8927-201ENSMUST00000181978 981 ntBASIC12.83□□□□□ -0.36
VcanQ62059 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.83□□□□□ -0.36
VcanQ62059 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VcanQ62059 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
VcanQ62059 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.82□□□□□ -0.36
VcanQ62059 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
VcanQ62059 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.82□□□□□ -0.36
VcanQ62059 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.82□□□□□ -0.36
VcanQ62059 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.82□□□□□ -0.36
VcanQ62059 Gm13123-201ENSMUST00000122173 492 ntBASIC12.82□□□□□ -0.36
VcanQ62059 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.82□□□□□ -0.36
VcanQ62059 Gm38317-201ENSMUST00000195564 343 ntBASIC12.82□□□□□ -0.36
VcanQ62059 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VcanQ62059 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VcanQ62059 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.82□□□□□ -0.36
VcanQ62059 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VcanQ62059 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Gm8385-201ENSMUST00000058999 643 ntBASIC12.82□□□□□ -0.36
VcanQ62059 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VcanQ62059 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.82□□□□□ -0.36
VcanQ62059 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.82□□□□□ -0.36
VcanQ62059 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VcanQ62059 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
VcanQ62059 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
VcanQ62059 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.81□□□□□ -0.36
VcanQ62059 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VcanQ62059 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.81□□□□□ -0.36
VcanQ62059 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.81□□□□□ -0.36
VcanQ62059 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.81□□□□□ -0.36
VcanQ62059 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.81□□□□□ -0.36
VcanQ62059 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
VcanQ62059 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
VcanQ62059 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.81□□□□□ -0.36
VcanQ62059 Mospd4-201ENSMUST00000180618 576 ntBASIC12.81□□□□□ -0.36
VcanQ62059 Gm28450-201ENSMUST00000187349 638 ntBASIC12.81□□□□□ -0.36
VcanQ62059 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VcanQ62059 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.81□□□□□ -0.36
VcanQ62059 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.81□□□□□ -0.36
VcanQ62059 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VcanQ62059 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.8□□□□□ -0.36
VcanQ62059 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.8□□□□□ -0.36
VcanQ62059 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.8□□□□□ -0.36
VcanQ62059 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.8□□□□□ -0.36
VcanQ62059 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.8□□□□□ -0.36
VcanQ62059 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.8□□□□□ -0.36
VcanQ62059 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.8□□□□□ -0.36
VcanQ62059 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.8□□□□□ -0.36
VcanQ62059 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.8□□□□□ -0.36
VcanQ62059 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
VcanQ62059 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.8□□□□□ -0.36
VcanQ62059 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.8□□□□□ -0.36
VcanQ62059 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.8□□□□□ -0.36
VcanQ62059 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcanQ62059 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms