Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.54□□□□□ -0.08
Smarcd1Q61466 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcd1Q61466 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Gm2445-201ENSMUST00000182798 989 ntBASIC14.53□□□□□ -0.08
Smarcd1Q61466 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.53□□□□□ -0.08
Smarcd1Q61466 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.53□□□□□ -0.08
Smarcd1Q61466 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Smarcd1Q61466 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd1Q61466 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcd1Q61466 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Smarcd1Q61466 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Gm18624-201ENSMUST00000220966 658 ntBASIC14.52□□□□□ -0.09
Smarcd1Q61466 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.52□□□□□ -0.09
Smarcd1Q61466 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd1Q61466 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Gm27772-201ENSMUST00000184900 187 ntBASIC14.51□□□□□ -0.09
Smarcd1Q61466 Gm45668-201ENSMUST00000211271 493 ntBASIC14.51□□□□□ -0.09
Smarcd1Q61466 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms