Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Slc6a4Q60857 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a4Q60857 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a4Q60857 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Slc6a4Q60857 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a4Q60857 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a4Q60857 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a4Q60857 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a4Q60857 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
Slc6a4Q60857 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Gm24420-201ENSMUST00000176676 59 ntBASIC14.28□□□□□ -0.12
Slc6a4Q60857 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.28□□□□□ -0.12
Slc6a4Q60857 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.28□□□□□ -0.12
Slc6a4Q60857 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.28□□□□□ -0.12
Slc6a4Q60857 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a4Q60857 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Slc6a4Q60857 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.27□□□□□ -0.12
Slc6a4Q60857 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Slc6a4Q60857 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.27□□□□□ -0.12
Slc6a4Q60857 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.27□□□□□ -0.13
Slc6a4Q60857 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.27□□□□□ -0.13
Slc6a4Q60857 Gm43094-201ENSMUST00000196549 921 ntBASIC14.27□□□□□ -0.13
Slc6a4Q60857 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a4Q60857 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.27□□□□□ -0.13
Slc6a4Q60857 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a4Q60857 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a4Q60857 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a4Q60857 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a4Q60857 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a4Q60857 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a4Q60857 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a4Q60857 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a4Q60857 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Gm15376-201ENSMUST00000122258 783 ntBASIC14.26□□□□□ -0.13
Slc6a4Q60857 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Mir7654-201ENSMUST00000185082 70 ntBASIC14.26□□□□□ -0.13
Slc6a4Q60857 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.26□□□□□ -0.13
Slc6a4Q60857 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc6a4Q60857 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.26□□□□□ -0.13
Slc6a4Q60857 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a4Q60857 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms