Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm27438-201ENSMUST00000183480 110 ntBASIC13.49□□□□□ -0.25
Col12a1Q60847 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Col12a1Q60847 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.49□□□□□ -0.25
Col12a1Q60847 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Gm10434-201ENSMUST00000101158 471 ntBASIC13.48□□□□□ -0.25
Col12a1Q60847 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col12a1Q60847 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.48□□□□□ -0.25
Col12a1Q60847 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.48□□□□□ -0.25
Col12a1Q60847 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col12a1Q60847 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Gm28450-201ENSMUST00000187349 638 ntBASIC13.48□□□□□ -0.25
Col12a1Q60847 Gm18893-201ENSMUST00000198416 943 ntBASIC13.48□□□□□ -0.25
Col12a1Q60847 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.48□□□□□ -0.25
Col12a1Q60847 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.48□□□□□ -0.25
Col12a1Q60847 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col12a1Q60847 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.48□□□□□ -0.25
Col12a1Q60847 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.48□□□□□ -0.25
Col12a1Q60847 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.48□□□□□ -0.25
Col12a1Q60847 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.48□□□□□ -0.25
Col12a1Q60847 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.48□□□□□ -0.25
Col12a1Q60847 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col12a1Q60847 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Col12a1Q60847 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col12a1Q60847 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col12a1Q60847 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Col12a1Q60847 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.47□□□□□ -0.25
Col12a1Q60847 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col12a1Q60847 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col12a1Q60847 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Col12a1Q60847 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Col12a1Q60847 Gm44967-201ENSMUST00000207047 631 ntBASIC13.47□□□□□ -0.25
Col12a1Q60847 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.47□□□□□ -0.25
Col12a1Q60847 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col12a1Q60847 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.47□□□□□ -0.25
Col12a1Q60847 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col12a1Q60847 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.46□□□□□ -0.25
Col12a1Q60847 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.46□□□□□ -0.25
Col12a1Q60847 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.46□□□□□ -0.25
Col12a1Q60847 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.46□□□□□ -0.25
Col12a1Q60847 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.46□□□□□ -0.25
Col12a1Q60847 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.46□□□□□ -0.25
Col12a1Q60847 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Gm19163-201ENSMUST00000223313 780 ntBASIC13.46□□□□□ -0.25
Col12a1Q60847 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Col12a1Q60847 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.46□□□□□ -0.25
Col12a1Q60847 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.46□□□□□ -0.25
Col12a1Q60847 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col12a1Q60847 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms