Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClpbQ60649 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.43□□□□□ -0.26
ClpbQ60649 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Gm8584-201ENSMUST00000171982 758 ntBASIC13.43□□□□□ -0.26
ClpbQ60649 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.43□□□□□ -0.26
ClpbQ60649 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Gm44344-201ENSMUST00000200287 129 ntBASIC13.43□□□□□ -0.26
ClpbQ60649 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.43□□□□□ -0.26
ClpbQ60649 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.43□□□□□ -0.26
ClpbQ60649 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ClpbQ60649 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ClpbQ60649 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClpbQ60649 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ClpbQ60649 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.42□□□□□ -0.26
ClpbQ60649 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ClpbQ60649 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.42□□□□□ -0.26
ClpbQ60649 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.42□□□□□ -0.26
ClpbQ60649 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Mir8102-201ENSMUST00000184148 139 ntBASIC13.42□□□□□ -0.26
ClpbQ60649 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.42□□□□□ -0.26
ClpbQ60649 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.42□□□□□ -0.26
ClpbQ60649 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ClpbQ60649 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ClpbQ60649 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.42□□□□□ -0.26
ClpbQ60649 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.42□□□□□ -0.26
ClpbQ60649 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClpbQ60649 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Matn2-206ENSMUST00000228570 2798 ntBASIC13.41□□□□□ -0.26
ClpbQ60649 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
ClpbQ60649 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.41□□□□□ -0.26
ClpbQ60649 Gm27306-201ENSMUST00000183970 107 ntBASIC13.41□□□□□ -0.26
ClpbQ60649 Gm27631-201ENSMUST00000184163 466 ntBASIC13.41□□□□□ -0.26
ClpbQ60649 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ClpbQ60649 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.41□□□□□ -0.26
ClpbQ60649 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms