Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.75■□□□□ 0.27
Vps54Q5SPW0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps54Q5SPW0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Vps54Q5SPW0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Gm5425-201ENSMUST00000214125 459 ntBASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.73■□□□□ 0.27
Vps54Q5SPW0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Gm18905-201ENSMUST00000205454 928 ntBASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms