Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Gm13464-201ENSMUST00000119418 935 ntBASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 AA619741-201ENSMUST00000195095 646 ntBASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.28■□□□□ 0.36
Usp48Q3V0C5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Snora78-201ENSMUST00000158630 128 ntBASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Gm45784-201ENSMUST00000188360 142 ntBASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Gm18307-201ENSMUST00000206864 949 ntBASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp48Q3V0C5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp48Q3V0C5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp48Q3V0C5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp48Q3V0C5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp48Q3V0C5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp48Q3V0C5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp48Q3V0C5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp48Q3V0C5 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Gm15460-201ENSMUST00000118147 391 ntBASIC17.26■□□□□ 0.35
Usp48Q3V0C5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp48Q3V0C5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Gm2451-201ENSMUST00000199447 999 ntBASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Gm10290-201ENSMUST00000200451 999 ntBASIC17.25■□□□□ 0.35
Usp48Q3V0C5 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp48Q3V0C5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms