Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Gm24447-201ENSMUST00000083977 338 ntBASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Gm24644-201ENSMUST00000157114 139 ntBASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Gm18473-201ENSMUST00000220543 868 ntBASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.63□□□□□ -0.07
Upf3aQ3ULJ3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Upf3aQ3ULJ3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upf3aQ3ULJ3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upf3aQ3ULJ3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upf3aQ3ULJ3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upf3aQ3ULJ3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upf3aQ3ULJ3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Upf3aQ3ULJ3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Upf3aQ3ULJ3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.61□□□□□ -0.07
Upf3aQ3ULJ3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms