Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Gm10434-201ENSMUST00000101158 471 ntBASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Gm25880-201ENSMUST00000104331 132 ntBASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Gm26315-201ENSMUST00000083890 321 ntBASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Gm29608-201ENSMUST00000190444 463 ntBASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Gm31256-201ENSMUST00000194705 506 ntBASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Spcs1-203ENSMUST00000226374 592 ntBASIC12.72□□□□□ -0.37
Spg11Q3UHA3 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.72□□□□□ -0.37
Spg11Q3UHA3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Spg11Q3UHA3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.72□□□□□ -0.37
Spg11Q3UHA3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Gm38210-201ENSMUST00000191944 809 ntBASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Gm37042-201ENSMUST00000193816 581 ntBASIC12.71□□□□□ -0.37
Spg11Q3UHA3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Spg11Q3UHA3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Spg11Q3UHA3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Spg11Q3UHA3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.71□□□□□ -0.38
Spg11Q3UHA3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Spg11Q3UHA3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Spg11Q3UHA3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.71□□□□□ -0.38
Spg11Q3UHA3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Spg11Q3UHA3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.71□□□□□ -0.38
Spg11Q3UHA3 Gm26956-201ENSMUST00000182176 986 ntBASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms