Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.16□□□□□ -0.14
Ebf1Q07802 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ebf1Q07802 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Matn2-206ENSMUST00000228570 2798 ntBASIC14.16□□□□□ -0.14
Ebf1Q07802 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.15□□□□□ -0.14
Ebf1Q07802 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ebf1Q07802 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ebf1Q07802 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.15□□□□□ -0.14
Ebf1Q07802 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.15□□□□□ -0.14
Ebf1Q07802 Mir7654-201ENSMUST00000185082 70 ntBASIC14.15□□□□□ -0.14
Ebf1Q07802 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.15□□□□□ -0.14
Ebf1Q07802 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.15□□□□□ -0.14
Ebf1Q07802 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.15□□□□□ -0.14
Ebf1Q07802 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.15□□□□□ -0.14
Ebf1Q07802 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.15□□□□□ -0.14
Ebf1Q07802 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.15□□□□□ -0.14
Ebf1Q07802 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.15□□□□□ -0.14
Ebf1Q07802 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ebf1Q07802 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ebf1Q07802 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ebf1Q07802 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ebf1Q07802 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ebf1Q07802 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ebf1Q07802 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Ebf1Q07802 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ebf1Q07802 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Ebf1Q07802 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Gm15678-201ENSMUST00000117573 960 ntBASIC14.14□□□□□ -0.15
Ebf1Q07802 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.14□□□□□ -0.15
Ebf1Q07802 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ebf1Q07802 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Ebf1Q07802 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ebf1Q07802 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Ebf1Q07802 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ebf1Q07802 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.14□□□□□ -0.15
Ebf1Q07802 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Ebf1Q07802 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ebf1Q07802 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ebf1Q07802 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.13□□□□□ -0.15
Ebf1Q07802 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.13□□□□□ -0.15
Ebf1Q07802 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.13□□□□□ -0.15
Ebf1Q07802 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ebf1Q07802 Gm4984-201ENSMUST00000115987 360 ntBASIC14.13□□□□□ -0.15
Ebf1Q07802 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Gm4804-201ENSMUST00000182234 999 ntBASIC14.13□□□□□ -0.15
Ebf1Q07802 Gm5279-201ENSMUST00000199575 745 ntBASIC14.13□□□□□ -0.15
Ebf1Q07802 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ebf1Q07802 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf1Q07802 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ebf1Q07802 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms