Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.68□□□□□ -0.22
Col9a1Q05722 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Gm38280-201ENSMUST00000192610 158 ntBASIC13.68□□□□□ -0.22
Col9a1Q05722 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC13.68□□□□□ -0.22
Col9a1Q05722 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Gm8285-201ENSMUST00000208293 759 ntBASIC13.68□□□□□ -0.22
Col9a1Q05722 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.68□□□□□ -0.22
Col9a1Q05722 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.68□□□□□ -0.22
Col9a1Q05722 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col9a1Q05722 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col9a1Q05722 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col9a1Q05722 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Col9a1Q05722 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col9a1Q05722 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col9a1Q05722 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Col9a1Q05722 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Col9a1Q05722 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.67□□□□□ -0.22
Col9a1Q05722 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.67□□□□□ -0.22
Col9a1Q05722 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Col9a1Q05722 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.67□□□□□ -0.22
Col9a1Q05722 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.67□□□□□ -0.22
Col9a1Q05722 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.67□□□□□ -0.22
Col9a1Q05722 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.67□□□□□ -0.22
Col9a1Q05722 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC13.67□□□□□ -0.22
Col9a1Q05722 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col9a1Q05722 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.67□□□□□ -0.22
Col9a1Q05722 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Col9a1Q05722 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col9a1Q05722 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Mir669o-201ENSMUST00000103898 96 ntBASIC13.66□□□□□ -0.22
Col9a1Q05722 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm16420-201ENSMUST00000120258 856 ntBASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm14726-201ENSMUST00000120623 896 ntBASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm9726-201ENSMUST00000180321 678 ntBASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm38210-201ENSMUST00000191944 809 ntBASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC13.66□□□□□ -0.22
Col9a1Q05722 AC153968.2-201ENSMUST00000215579 1140 ntBASIC13.66□□□□□ -0.22
Col9a1Q05722 AC153529.1-201ENSMUST00000217818 370 ntBASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm8768-201ENSMUST00000220020 826 ntBASIC13.66□□□□□ -0.22
Col9a1Q05722 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.66□□□□□ -0.22
Col9a1Q05722 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm44286-201ENSMUST00000204098 1487 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms