Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.06□□□□□ -0.16
Pfdn6Q03958 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Gm45453-201ENSMUST00000211758 853 ntBASIC14.06□□□□□ -0.16
Pfdn6Q03958 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.05□□□□□ -0.16
Pfdn6Q03958 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.05□□□□□ -0.16
Pfdn6Q03958 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Pfdn6Q03958 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Gm5566-201ENSMUST00000116118 459 ntBASIC14.04□□□□□ -0.16
Pfdn6Q03958 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Gm9719-201ENSMUST00000162765 543 ntBASIC14.04□□□□□ -0.16
Pfdn6Q03958 Gm37935-201ENSMUST00000192012 982 ntBASIC14.04□□□□□ -0.16
Pfdn6Q03958 Gm5312-201ENSMUST00000203728 547 ntBASIC14.04□□□□□ -0.16
Pfdn6Q03958 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pfdn6Q03958 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.04□□□□□ -0.16
Pfdn6Q03958 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.04□□□□□ -0.16
Pfdn6Q03958 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 BC001981-202ENSMUST00000191393 1545 ntBASIC14.04□□□□□ -0.16
Pfdn6Q03958 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn6Q03958 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pfdn6Q03958 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms