Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nkx3-2P97503 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.21□□□□□ -0.29
Nkx3-2P97503 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Gm6916-202ENSMUST00000205523 195 ntBASIC13.21□□□□□ -0.29
Nkx3-2P97503 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.21□□□□□ -0.29
Nkx3-2P97503 Gm44608-201ENSMUST00000206827 855 ntBASIC13.21□□□□□ -0.29
Nkx3-2P97503 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.21□□□□□ -0.29
Nkx3-2P97503 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.21□□□□□ -0.29
Nkx3-2P97503 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nkx3-2P97503 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx3-2P97503 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx3-2P97503 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx3-2P97503 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Nkx3-2P97503 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx3-2P97503 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Nkx3-2P97503 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx3-2P97503 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx3-2P97503 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx3-2P97503 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.21□□□□□ -0.3
Nkx3-2P97503 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx3-2P97503 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx3-2P97503 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.2□□□□□ -0.3
Nkx3-2P97503 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.2□□□□□ -0.3
Nkx3-2P97503 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx3-2P97503 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx3-2P97503 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.19□□□□□ -0.3
Nkx3-2P97503 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx3-2P97503 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Gm15393-201ENSMUST00000120499 219 ntBASIC13.19□□□□□ -0.3
Nkx3-2P97503 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx3-2P97503 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms