Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
H3f3aP84244 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.44□□□□□ -0.42
H3f3aP84244 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
H3f3aP84244 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Gm4875-201ENSMUST00000118257 786 ntBASIC12.44□□□□□ -0.42
H3f3aP84244 Gm12151-201ENSMUST00000121374 290 ntBASIC12.44□□□□□ -0.42
H3f3aP84244 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
H3f3aP84244 Gm10766-202ENSMUST00000194123 606 ntBASIC12.44□□□□□ -0.42
H3f3aP84244 Gm20949-201ENSMUST00000206478 952 ntBASIC12.44□□□□□ -0.42
H3f3aP84244 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.44□□□□□ -0.42
H3f3aP84244 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.44□□□□□ -0.42
H3f3aP84244 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
H3f3aP84244 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
H3f3aP84244 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
H3f3aP84244 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.44□□□□□ -0.42
H3f3aP84244 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H3f3aP84244 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
H3f3aP84244 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
H3f3aP84244 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.43□□□□□ -0.42
H3f3aP84244 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.43□□□□□ -0.42
H3f3aP84244 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.43□□□□□ -0.42
H3f3aP84244 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
H3f3aP84244 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
H3f3aP84244 Gm4804-201ENSMUST00000182234 999 ntBASIC12.43□□□□□ -0.42
H3f3aP84244 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.43□□□□□ -0.42
H3f3aP84244 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.43□□□□□ -0.42
H3f3aP84244 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
H3f3aP84244 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.43□□□□□ -0.42
H3f3aP84244 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
H3f3aP84244 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
H3f3aP84244 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.43□□□□□ -0.42
H3f3aP84244 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.43□□□□□ -0.42
H3f3aP84244 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H3f3aP84244 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.42□□□□□ -0.42
H3f3aP84244 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
H3f3aP84244 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Gm15487-201ENSMUST00000122373 465 ntBASIC12.42□□□□□ -0.42
H3f3aP84244 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.42□□□□□ -0.42
H3f3aP84244 Gm27838-201ENSMUST00000184829 128 ntBASIC12.42□□□□□ -0.42
H3f3aP84244 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.42□□□□□ -0.42
H3f3aP84244 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.42□□□□□ -0.42
H3f3aP84244 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.42□□□□□ -0.42
H3f3aP84244 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
H3f3aP84244 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms