Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.8□□□□□ -0.2
Shox2P70390 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Shox2P70390 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.8□□□□□ -0.2
Shox2P70390 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Shox2P70390 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Gm5479-201ENSMUST00000160578 435 ntBASIC13.8□□□□□ -0.2
Shox2P70390 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.8□□□□□ -0.2
Shox2P70390 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.79□□□□□ -0.2
Shox2P70390 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.79□□□□□ -0.2
Shox2P70390 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Shox2P70390 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.79□□□□□ -0.2
Shox2P70390 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.79□□□□□ -0.2
Shox2P70390 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.79□□□□□ -0.2
Shox2P70390 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Gm6089-201ENSMUST00000197666 938 ntBASIC13.79□□□□□ -0.2
Shox2P70390 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Shox2P70390 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Shox2P70390 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.79□□□□□ -0.2
Shox2P70390 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Shox2P70390 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shox2P70390 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.78□□□□□ -0.2
Shox2P70390 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shox2P70390 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.78□□□□□ -0.2
Shox2P70390 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Shox2P70390 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Gm12644-201ENSMUST00000119935 606 ntBASIC13.78□□□□□ -0.2
Shox2P70390 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Gm2272-201ENSMUST00000194903 582 ntBASIC13.78□□□□□ -0.2
Shox2P70390 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.78□□□□□ -0.2
Shox2P70390 Gm44608-201ENSMUST00000206827 855 ntBASIC13.78□□□□□ -0.2
Shox2P70390 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.78□□□□□ -0.2
Shox2P70390 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Shox2P70390 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Shox2P70390 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Shox2P70390 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shox2P70390 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shox2P70390 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms