Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.38□□□□□ -0.11
Msx3P70354 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.38□□□□□ -0.11
Msx3P70354 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.38□□□□□ -0.11
Msx3P70354 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Msx3P70354 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Msx3P70354 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.38□□□□□ -0.11
Msx3P70354 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msx3P70354 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Msx3P70354 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.37□□□□□ -0.11
Msx3P70354 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.37□□□□□ -0.11
Msx3P70354 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Msx3P70354 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Msx3P70354 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.37□□□□□ -0.11
Msx3P70354 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.37□□□□□ -0.11
Msx3P70354 Gm15653-201ENSMUST00000119247 907 ntBASIC14.37□□□□□ -0.11
Msx3P70354 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Gm5779-201ENSMUST00000218467 910 ntBASIC14.37□□□□□ -0.11
Msx3P70354 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Msx3P70354 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.37□□□□□ -0.11
Msx3P70354 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.37□□□□□ -0.11
Msx3P70354 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.37□□□□□ -0.11
Msx3P70354 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msx3P70354 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Msx3P70354 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Msx3P70354 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.36□□□□□ -0.11
Msx3P70354 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Msx3P70354 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Msx3P70354 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.36□□□□□ -0.11
Msx3P70354 Gm6415-201ENSMUST00000118488 348 ntBASIC14.36□□□□□ -0.11
Msx3P70354 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Msx3P70354 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.36□□□□□ -0.11
Msx3P70354 Gm6736-201ENSMUST00000166583 948 ntBASIC14.36□□□□□ -0.11
Msx3P70354 Gm28630-201ENSMUST00000187806 498 ntBASIC14.36□□□□□ -0.11
Msx3P70354 Gm6916-202ENSMUST00000205523 195 ntBASIC14.36□□□□□ -0.11
Msx3P70354 Gm44719-201ENSMUST00000206404 149 ntBASIC14.36□□□□□ -0.11
Msx3P70354 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Msx3P70354 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Msx3P70354 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.36□□□□□ -0.11
Msx3P70354 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.36□□□□□ -0.11
Msx3P70354 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Msx3P70354 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msx3P70354 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Msx3P70354 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms