Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.66□□□□□ -0.54
Pdlim4P70271 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Pdlim4P70271 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pdlim4P70271 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.65□□□□□ -0.54
Pdlim4P70271 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.65□□□□□ -0.54
Pdlim4P70271 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pdlim4P70271 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Pdlim4P70271 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.65□□□□□ -0.54
Pdlim4P70271 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.65□□□□□ -0.54
Pdlim4P70271 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 AA543401-201ENSMUST00000164248 1269 ntBASIC11.65□□□□□ -0.54
Pdlim4P70271 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pdlim4P70271 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.65□□□□□ -0.54
Pdlim4P70271 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.65□□□□□ -0.54
Pdlim4P70271 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Mir125a-201ENSMUST00000083545 68 ntBASIC11.65□□□□□ -0.54
Pdlim4P70271 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pdlim4P70271 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Pdlim4P70271 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim4P70271 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Pdlim4P70271 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pdlim4P70271 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pdlim4P70271 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pdlim4P70271 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pdlim4P70271 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.65□□□□□ -0.55
Pdlim4P70271 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pdlim4P70271 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pdlim4P70271 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Pdlim4P70271 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.64□□□□□ -0.55
Pdlim4P70271 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pdlim4P70271 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Gm27618-201ENSMUST00000183671 60 ntBASIC11.64□□□□□ -0.55
Pdlim4P70271 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.64□□□□□ -0.55
Pdlim4P70271 Dupd1-202ENSMUST00000224735 548 ntBASIC11.64□□□□□ -0.55
Pdlim4P70271 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Pdlim4P70271 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pdlim4P70271 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Pdlim4P70271 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.64□□□□□ -0.55
Pdlim4P70271 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.64□□□□□ -0.55
Pdlim4P70271 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.64□□□□□ -0.55
Pdlim4P70271 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim4P70271 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms