Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.1□□□□□ -0.31
Six5P70178 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.1□□□□□ -0.31
Six5P70178 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Six5P70178 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.1□□□□□ -0.31
Six5P70178 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Six5P70178 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.1□□□□□ -0.31
Six5P70178 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Six5P70178 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Six5P70178 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Six5P70178 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Six5P70178 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Six5P70178 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.09□□□□□ -0.31
Six5P70178 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Six5P70178 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Six5P70178 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Six5P70178 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.09□□□□□ -0.31
Six5P70178 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Gm15460-201ENSMUST00000118147 391 ntBASIC13.09□□□□□ -0.31
Six5P70178 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Six5P70178 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.09□□□□□ -0.31
Six5P70178 Gm5425-201ENSMUST00000214125 459 ntBASIC13.09□□□□□ -0.31
Six5P70178 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.09□□□□□ -0.31
Six5P70178 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six5P70178 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Six5P70178 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Six5P70178 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Six5P70178 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Six5P70178 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Six5P70178 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Six5P70178 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Six5P70178 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Six5P70178 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Six5P70178 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.08□□□□□ -0.32
Six5P70178 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.08□□□□□ -0.32
Six5P70178 Gm13223-201ENSMUST00000118609 747 ntBASIC13.08□□□□□ -0.32
Six5P70178 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.08□□□□□ -0.32
Six5P70178 Gm17837-201ENSMUST00000186435 985 ntBASIC13.08□□□□□ -0.32
Six5P70178 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.08□□□□□ -0.32
Six5P70178 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.08□□□□□ -0.32
Six5P70178 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Six5P70178 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.08□□□□□ -0.32
Six5P70178 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Six5P70178 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Rubie-203ENSMUST00000227803 2430 ntBASIC13.08□□□□□ -0.32
Six5P70178 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Six5P70178 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Six5P70178 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Six5P70178 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Six5P70178 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Six5P70178 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Six5P70178 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Six5P70178 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Six5P70178 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms