Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hmgb1P63158 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Hmgb1P63158 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.38■□□□□ 0.05
Hmgb1P63158 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Hmgb1P63158 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Hmgb1P63158 Gm13015-201ENSMUST00000118674 204 ntBASIC15.38■□□□□ 0.05
Hmgb1P63158 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.38■□□□□ 0.05
Hmgb1P63158 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.38■□□□□ 0.05
Hmgb1P63158 Gm27631-201ENSMUST00000184163 466 ntBASIC15.38■□□□□ 0.05
Hmgb1P63158 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Hmgb1P63158 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hmgb1P63158 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.38■□□□□ 0.05
Hmgb1P63158 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hmgb1P63158 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hmgb1P63158 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Hmgb1P63158 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Hmgb1P63158 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.37■□□□□ 0.05
Hmgb1P63158 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.37■□□□□ 0.05
Hmgb1P63158 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.37■□□□□ 0.05
Hmgb1P63158 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.37■□□□□ 0.05
Hmgb1P63158 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.37■□□□□ 0.05
Hmgb1P63158 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Hmgb1P63158 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.37■□□□□ 0.05
Hmgb1P63158 Mir6990-201ENSMUST00000183724 91 ntBASIC15.37■□□□□ 0.05
Hmgb1P63158 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Hmgb1P63158 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.37■□□□□ 0.05
Hmgb1P63158 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.37■□□□□ 0.05
Hmgb1P63158 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Hmgb1P63158 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.37■□□□□ 0.05
Hmgb1P63158 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Hmgb1P63158 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmgb1P63158 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.36■□□□□ 0.05
Hmgb1P63158 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Gm2445-201ENSMUST00000182798 989 ntBASIC15.36■□□□□ 0.05
Hmgb1P63158 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.36■□□□□ 0.05
Hmgb1P63158 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hmgb1P63158 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.36■□□□□ 0.05
Hmgb1P63158 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Hmgb1P63158 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Hmgb1P63158 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Hmgb1P63158 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgb1P63158 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms