Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
Ybx1P62960 Gm12928-201ENSMUST00000117115 573 ntBASIC14.28□□□□□ -0.12
Ybx1P62960 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.28□□□□□ -0.12
Ybx1P62960 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ybx1P62960 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.28□□□□□ -0.12
Ybx1P62960 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.28□□□□□ -0.12
Ybx1P62960 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.28□□□□□ -0.12
Ybx1P62960 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ybx1P62960 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ybx1P62960 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ybx1P62960 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ybx1P62960 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ybx1P62960 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ybx1P62960 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ybx1P62960 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Ybx1P62960 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Ybx1P62960 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Ybx1P62960 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.27□□□□□ -0.12
Ybx1P62960 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ybx1P62960 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ybx1P62960 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ybx1P62960 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.27□□□□□ -0.12
Ybx1P62960 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.27□□□□□ -0.13
Ybx1P62960 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ybx1P62960 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.27□□□□□ -0.13
Ybx1P62960 Gm26464-201ENSMUST00000157094 305 ntBASIC14.27□□□□□ -0.13
Ybx1P62960 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ybx1P62960 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ybx1P62960 Gm27486-201ENSMUST00000184923 80 ntBASIC14.27□□□□□ -0.13
Ybx1P62960 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ybx1P62960 Gm7287-201ENSMUST00000205267 602 ntBASIC14.27□□□□□ -0.13
Ybx1P62960 Gm7561-201ENSMUST00000211203 886 ntBASIC14.27□□□□□ -0.13
Ybx1P62960 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ybx1P62960 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ybx1P62960 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ybx1P62960 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ybx1P62960 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ybx1P62960 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Ybx1P62960 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ybx1P62960 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ybx1P62960 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ybx1P62960 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.27□□□□□ -0.13
Ybx1P62960 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ybx1P62960 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ybx1P62960 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ybx1P62960 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ybx1P62960 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.26□□□□□ -0.13
Ybx1P62960 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.26□□□□□ -0.13
Ybx1P62960 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.26□□□□□ -0.13
Ybx1P62960 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.26□□□□□ -0.13
Ybx1P62960 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.26□□□□□ -0.13
Ybx1P62960 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Mir497b-201ENSMUST00000093601 125 ntBASIC14.26□□□□□ -0.13
Ybx1P62960 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.26□□□□□ -0.13
Ybx1P62960 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.26□□□□□ -0.13
Ybx1P62960 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ybx1P62960 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ybx1P62960 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.25□□□□□ -0.13
Ybx1P62960 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms