Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lsm3P62311 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.72□□□□□ -0.37
Lsm3P62311 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.72□□□□□ -0.37
Lsm3P62311 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm3P62311 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.71□□□□□ -0.37
Lsm3P62311 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm3P62311 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm3P62311 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm3P62311 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm3P62311 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm3P62311 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lsm3P62311 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lsm3P62311 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Lsm3P62311 Gm29518-201ENSMUST00000190858 372 ntBASIC12.71□□□□□ -0.37
Lsm3P62311 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.71□□□□□ -0.37
Lsm3P62311 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Lsm3P62311 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm3P62311 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Lsm3P62311 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm3P62311 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm3P62311 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lsm3P62311 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm3P62311 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Lsm3P62311 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.71□□□□□ -0.38
Lsm3P62311 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm3P62311 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm3P62311 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.71□□□□□ -0.38
Lsm3P62311 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm3P62311 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lsm3P62311 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Lsm3P62311 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lsm3P62311 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lsm3P62311 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.7□□□□□ -0.38
Lsm3P62311 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.7□□□□□ -0.38
Lsm3P62311 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.7□□□□□ -0.38
Lsm3P62311 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.7□□□□□ -0.38
Lsm3P62311 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.7□□□□□ -0.38
Lsm3P62311 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Lsm3P62311 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lsm3P62311 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lsm3P62311 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm3P62311 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lsm3P62311 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
Lsm3P62311 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.69□□□□□ -0.38
Lsm3P62311 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Lsm3P62311 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.69□□□□□ -0.38
Lsm3P62311 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lsm3P62311 Gm18489-201ENSMUST00000172565 551 ntBASIC12.69□□□□□ -0.38
Lsm3P62311 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Lsm3P62311 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Lsm3P62311 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Lsm3P62311 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm3P62311 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms