Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sec61a1P61620 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Sec61a1P61620 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.33□□□□□ -0.44
Sec61a1P61620 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sec61a1P61620 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sec61a1P61620 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Sec61a1P61620 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.33□□□□□ -0.44
Sec61a1P61620 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Sec61a1P61620 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Sec61a1P61620 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.33□□□□□ -0.44
Sec61a1P61620 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Sec61a1P61620 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Grk6-205ENSMUST00000224653 2976 ntBASIC12.32□□□□□ -0.44
Sec61a1P61620 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.32□□□□□ -0.44
Sec61a1P61620 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Rprl2-201ENSMUST00000157150 290 ntBASIC12.32□□□□□ -0.44
Sec61a1P61620 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Sec61a1P61620 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sec61a1P61620 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.32□□□□□ -0.44
Sec61a1P61620 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a1P61620 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.32□□□□□ -0.44
Sec61a1P61620 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sec61a1P61620 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.31□□□□□ -0.44
Sec61a1P61620 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sec61a1P61620 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sec61a1P61620 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sec61a1P61620 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Sec61a1P61620 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.44
Sec61a1P61620 Gm18889-201ENSMUST00000174284 929 ntBASIC12.31□□□□□ -0.44
Sec61a1P61620 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.31□□□□□ -0.44
Sec61a1P61620 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.31□□□□□ -0.44
Sec61a1P61620 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.31□□□□□ -0.44
Sec61a1P61620 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sec61a1P61620 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms