Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.4□□□□□ -0.42
Sf3b6P59708 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sf3b6P59708 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sf3b6P59708 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.4□□□□□ -0.42
Sf3b6P59708 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Sf3b6P59708 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Sf3b6P59708 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Gm27525-201ENSMUST00000184465 107 ntBASIC12.4□□□□□ -0.42
Sf3b6P59708 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.4□□□□□ -0.42
Sf3b6P59708 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.4□□□□□ -0.42
Sf3b6P59708 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.4□□□□□ -0.42
Sf3b6P59708 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sf3b6P59708 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Sf3b6P59708 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sf3b6P59708 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sf3b6P59708 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Sf3b6P59708 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.4□□□□□ -0.42
Sf3b6P59708 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Sf3b6P59708 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.4□□□□□ -0.43
Sf3b6P59708 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sf3b6P59708 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sf3b6P59708 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sf3b6P59708 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sf3b6P59708 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Sf3b6P59708 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Sf3b6P59708 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sf3b6P59708 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.39□□□□□ -0.43
Sf3b6P59708 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sf3b6P59708 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Sf3b6P59708 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sf3b6P59708 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.39□□□□□ -0.43
Sf3b6P59708 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.39□□□□□ -0.43
Sf3b6P59708 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.39□□□□□ -0.43
Sf3b6P59708 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.39□□□□□ -0.43
Sf3b6P59708 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sf3b6P59708 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sf3b6P59708 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.39□□□□□ -0.43
Sf3b6P59708 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sf3b6P59708 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sf3b6P59708 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.38□□□□□ -0.43
Sf3b6P59708 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.38□□□□□ -0.43
Sf3b6P59708 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sf3b6P59708 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Sf3b6P59708 Gm5264-201ENSMUST00000190584 848 ntBASIC12.38□□□□□ -0.43
Sf3b6P59708 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.38□□□□□ -0.43
Sf3b6P59708 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms