Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.2□□□□□ -0.3
Nup43P59235 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nup43P59235 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.2□□□□□ -0.3
Nup43P59235 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.2□□□□□ -0.3
Nup43P59235 Gm14057-201ENSMUST00000120631 482 ntBASIC13.2□□□□□ -0.3
Nup43P59235 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.2□□□□□ -0.3
Nup43P59235 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.2□□□□□ -0.3
Nup43P59235 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.2□□□□□ -0.3
Nup43P59235 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.2□□□□□ -0.3
Nup43P59235 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.2□□□□□ -0.3
Nup43P59235 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.2□□□□□ -0.3
Nup43P59235 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nup43P59235 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.2□□□□□ -0.3
Nup43P59235 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup43P59235 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.19□□□□□ -0.3
Nup43P59235 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nup43P59235 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Gm4804-201ENSMUST00000182234 999 ntBASIC13.19□□□□□ -0.3
Nup43P59235 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.19□□□□□ -0.3
Nup43P59235 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Gm42790-201ENSMUST00000201268 969 ntBASIC13.19□□□□□ -0.3
Nup43P59235 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nup43P59235 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup43P59235 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nup43P59235 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Nup43P59235 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Nup43P59235 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nup43P59235 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nup43P59235 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nup43P59235 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.18□□□□□ -0.3
Nup43P59235 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Nup43P59235 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.18□□□□□ -0.3
Nup43P59235 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.18□□□□□ -0.3
Nup43P59235 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.18□□□□□ -0.3
Nup43P59235 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.18□□□□□ -0.3
Nup43P59235 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nup43P59235 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Nup43P59235 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nup43P59235 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.18□□□□□ -0.3
Nup43P59235 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nup43P59235 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms