Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Gm16026-204ENSMUST00000162652 683 ntBASIC12.75□□□□□ -0.37
Cdh11P55288 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdh11P55288 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Gm10253-201ENSMUST00000194270 940 ntBASIC12.75□□□□□ -0.37
Cdh11P55288 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.75□□□□□ -0.37
Cdh11P55288 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdh11P55288 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdh11P55288 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdh11P55288 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdh11P55288 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cdh11P55288 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Cdh11P55288 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdh11P55288 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.74□□□□□ -0.37
Cdh11P55288 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdh11P55288 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdh11P55288 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Cdh11P55288 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Mir449b-201ENSMUST00000104833 80 ntBASIC12.74□□□□□ -0.37
Cdh11P55288 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdh11P55288 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.74□□□□□ -0.37
Cdh11P55288 Gm8584-201ENSMUST00000171982 758 ntBASIC12.74□□□□□ -0.37
Cdh11P55288 Gm18737-201ENSMUST00000173594 937 ntBASIC12.74□□□□□ -0.37
Cdh11P55288 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdh11P55288 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.74□□□□□ -0.37
Cdh11P55288 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.74□□□□□ -0.37
Cdh11P55288 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.74□□□□□ -0.37
Cdh11P55288 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Cdh11P55288 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdh11P55288 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdh11P55288 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdh11P55288 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdh11P55288 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cdh11P55288 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.73□□□□□ -0.37
Cdh11P55288 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdh11P55288 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Gm25287-201ENSMUST00000103846 110 ntBASIC12.73□□□□□ -0.37
Cdh11P55288 Gm22918-201ENSMUST00000103855 110 ntBASIC12.73□□□□□ -0.37
Cdh11P55288 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdh11P55288 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Gm14057-201ENSMUST00000120631 482 ntBASIC12.73□□□□□ -0.37
Cdh11P55288 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdh11P55288 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms