Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Abcd3P55096 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Abcd3P55096 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Abcd3P55096 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Gm8410-201ENSMUST00000117225 605 ntBASIC12.51□□□□□ -0.41
Abcd3P55096 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.51□□□□□ -0.41
Abcd3P55096 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Abcd3P55096 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Abcd3P55096 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.51□□□□□ -0.41
Abcd3P55096 Gm6916-202ENSMUST00000205523 195 ntBASIC12.51□□□□□ -0.41
Abcd3P55096 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Abcd3P55096 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Abcd3P55096 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Abcd3P55096 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.51□□□□□ -0.41
Abcd3P55096 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Abcd3P55096 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.5□□□□□ -0.41
Abcd3P55096 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.5□□□□□ -0.41
Abcd3P55096 Gm10576-201ENSMUST00000191927 825 ntBASIC12.5□□□□□ -0.41
Abcd3P55096 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.5□□□□□ -0.41
Abcd3P55096 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Abcd3P55096 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Abcd3P55096 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Abcd3P55096 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.5□□□□□ -0.41
Abcd3P55096 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Abcd3P55096 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Abcd3P55096 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Abcd3P55096 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abcd3P55096 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Abcd3P55096 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Abcd3P55096 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Abcd3P55096 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.49□□□□□ -0.41
Abcd3P55096 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Abcd3P55096 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Abcd3P55096 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.49□□□□□ -0.41
Abcd3P55096 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.49□□□□□ -0.41
Abcd3P55096 Gm7063-201ENSMUST00000186840 981 ntBASIC12.49□□□□□ -0.41
Abcd3P55096 Gm29741-201ENSMUST00000192667 421 ntBASIC12.49□□□□□ -0.41
Abcd3P55096 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.49□□□□□ -0.41
Abcd3P55096 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.49□□□□□ -0.41
Abcd3P55096 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Abcd3P55096 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Abcd3P55096 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Abcd3P55096 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abcd3P55096 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abcd3P55096 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms