Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Msh6P54276 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Msh6P54276 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Msh6P54276 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Msh6P54276 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Msh6P54276 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Msh6P54276 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Gm16177-201ENSMUST00000120728 718 ntBASIC17.56■□□□□ 0.4
Msh6P54276 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.56■□□□□ 0.4
Msh6P54276 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Msh6P54276 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.56■□□□□ 0.4
Msh6P54276 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Msh6P54276 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.56■□□□□ 0.4
Msh6P54276 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Msh6P54276 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh6P54276 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Msh6P54276 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.55■□□□□ 0.4
Msh6P54276 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.55■□□□□ 0.4
Msh6P54276 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.55■□□□□ 0.4
Msh6P54276 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.55■□□□□ 0.4
Msh6P54276 Gm38223-201ENSMUST00000194484 695 ntBASIC17.55■□□□□ 0.4
Msh6P54276 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.55■□□□□ 0.4
Msh6P54276 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.55■□□□□ 0.4
Msh6P54276 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.55■□□□□ 0.4
Msh6P54276 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Msh6P54276 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh6P54276 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.54■□□□□ 0.4
Msh6P54276 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.54■□□□□ 0.4
Msh6P54276 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Msh6P54276 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Msh6P54276 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.54■□□□□ 0.4
Msh6P54276 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Msh6P54276 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.54■□□□□ 0.4
Msh6P54276 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh6P54276 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms