Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Fdft1P53798 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Gm43474-201ENSMUST00000196415 774 ntBASIC13.98□□□□□ -0.17
Fdft1P53798 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Gm18049-201ENSMUST00000208909 581 ntBASIC13.98□□□□□ -0.17
Fdft1P53798 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Fdft1P53798 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Fdft1P53798 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fdft1P53798 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Fdft1P53798 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Fdft1P53798 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Fdft1P53798 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Fdft1P53798 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Fdft1P53798 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Fdft1P53798 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.97□□□□□ -0.17
Fdft1P53798 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.97□□□□□ -0.17
Fdft1P53798 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.97□□□□□ -0.17
Fdft1P53798 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Fdft1P53798 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Fdft1P53798 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Fdft1P53798 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Fdft1P53798 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Fdft1P53798 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fdft1P53798 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Fdft1P53798 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.96□□□□□ -0.17
Fdft1P53798 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.96□□□□□ -0.17
Fdft1P53798 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.96□□□□□ -0.17
Fdft1P53798 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Fdft1P53798 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Gm25287-201ENSMUST00000103846 110 ntBASIC13.96□□□□□ -0.17
Fdft1P53798 Gm22918-201ENSMUST00000103855 110 ntBASIC13.96□□□□□ -0.17
Fdft1P53798 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.96□□□□□ -0.17
Fdft1P53798 Gm12882-201ENSMUST00000121696 517 ntBASIC13.96□□□□□ -0.17
Fdft1P53798 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.96□□□□□ -0.17
Fdft1P53798 Gm9824-201ENSMUST00000178707 561 ntBASIC13.96□□□□□ -0.17
Fdft1P53798 Gm27702-201ENSMUST00000184512 56 ntBASIC13.96□□□□□ -0.17
Fdft1P53798 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.96□□□□□ -0.17
Fdft1P53798 Chchd1-203ENSMUST00000224633 557 ntBASIC13.96□□□□□ -0.17
Fdft1P53798 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Fdft1P53798 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fdft1P53798 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fdft1P53798 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fdft1P53798 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fdft1P53798 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Fdft1P53798 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.95□□□□□ -0.18
Fdft1P53798 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Fdft1P53798 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fdft1P53798 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms